Quantitative and qualitative RNA-seq based evaluation of Epstein-Barr virus transcription in type I latency Burkitt's lymphoma cells

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SRP003764

Homo sapiens

1 Downloadable Sample

Illumina Genome Analyzer II

Submitter Supplied Information

Description

RNASeq was used to evaluate the Epstein-Barr virus transcriptome. A pipeline was developed for the analysis of EBV specific transcripts and applied to EBV positive Burkitt's lymphoma cells exhibiting type I latency. PolyA fractions of whole cell RNA was sequenced using 74b single-end reads on an Illumina GA2x machine.

PubMed ID

20943983

Publication Title

Quantitative and qualitative RNA-Seq-based evaluation of Epstein-Barr virus transcription in type I latency Burkitt's lymphoma cells.

Total Samples

Submitter’s Institution

Flemington

Authors

Lin Z, Xu G, Deng N, Taylor C, Zhu D, Flemington EK

Source Repository

Sequence Read Archive (SRA)

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