Differential Gene Expression between ATRA treated and control HL-60 Cells [RNA-seq]

These RNA-seq data were generated to correlate with genomic interaction data in a related Hi-C analysis. Analysis revealed differential expressed genes in ATRA treated and control HL-60 cells. Changes of gene expression with topological associated domains (TADs) were showd to be correlated with chromatin structure alteration Overall design: HL-60 cells with ATRA or ethanol treated for 4 days were used to generate RNA-seq library, in replicate.

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Li Y, He Y, Liang Z, Wang Y, Chen F, Djekidel MN, Li G, Zhang X, Xiang S, Wang Z, Gao J, Zhang MQ, Chen Y